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The way doctors communicate with patients during office visits can affect the quality of care. Studying conversations between doctors and patients can help doctors improve their communication skills.

To study conversations, researchers rely on written records, or transcripts, of office visits. They read the transcripts and give each conversation topic a label. For example, topics may include smoking or pain. But labeling topics in this way may take a lot of time.

In this project, the research team created and tested a new method to make this work easier using natural language processing, or NLP. With NLP, computer programs interpret written language. NLP methods use a process called machine learning, where computer programs use data to learn how to perform different tasks with little or no human input.

Patients may respond differently to the same treatment due to individual traits such as age or gender. Knowing how different traits can affect a patient's response to treatment can help doctors and patients make better treatment decisions. For example, this information can help doctors know what types of cancer medicines work better for certain patients. This project focuses on improving the methods that researchers use to compare how treatments work for different patients.

In this project, the research team developed and tested a statistical method called random forests, or RF. RF is a way to analyze data using a technique called machine learning. In machine learning, computers use data to learn how to perform different tasks with little or no human input. Many types of RF methods exist. The team compared multiple RF methods to learn how well the methods would work to find out how patients with different traits respond to the same treatment.

To access the R package, please visit the randomForestSRC CRAN webpage.

Electronic health records store a lot of data about a patient. These data often include age, health problems, current medicines, and lab results. Looking at these data may help doctors treating patients after a trauma predict how likely it is that they will respond well to a treatment and survive. This information can help doctors make better treatment decisions. But first, researchers need to figure out how to combine and analyze data to make accurate predictions. In this study, the research team created new statistical methods to combine data from patient records. They used these methods to predict patient health outcomes. Then the team used health record data collected from patients in hospital trauma centers to test their predictions.

To access the methods and software, please visit the following GitHubs:

• origami
• varimpact
• opttx

Electronic health records, or EHRs, have information about a patient's health such as test results, diagnoses, and treatments. EHRs also have clinical notes that doctors and patients can use to track goals and decisions.

Clinical notes may be useful for research or to help improve care. But it's hard to get information from these notes across large groups of patients. The notes may use different ways to describe the same thing. For example, high blood pressure may be called hypertension. Also, the notes may use abbreviations or have spelling mistakes.

In this project, the research team designed and built a search engine to make EHR notes easier to search and use for patient care and research.

Clinical notes in electronic health records, or EHRs, may contain information that can help researchers study and compare treatments. But it takes researchers a lot of time to find information in EHR notes.

Natural language processing, or NLP, methods can help researchers find information in EHR notes. With NLP, computer programs read and identify written language to make it easier to sort and study. But in EHR notes, some sentences may contain more than one topic. Also, EHR notes may discuss a single topic over many sentences. In these cases, current NLP methods don't work well to find complete and accurate information about a specific topic.

In this study, the research team developed and tested new NLP methods to identify topics from EHR notes.